honestly don't do that to yourself imo and no these issues prob won't look any better with a more cumulative read.
when I started reading op , I wasn't old enough to look into any inconsistencies
or flaws , "abandoned plotlines" in the story. at this point I think a lot of us are just reading to finish what we started reading a long time ago. I definitely don't see this series rekindling the sort of emotion I felt towards it as a teenager and I also don't expect it too anymore . when you start seeing op that way, you won't bother .
Welp, that's not encouraging
I feel like everytime i have criticism about One Piece is always countered with:
1 - wait for it, it's not over
2 - the problem is your expectations
3 - it's because of the weekly reading, when you can binge it's much better
2 is already solved, after 1052 i truly have no expectations for any characters left
wanted to check if 3 would do anything on a re-read, because earlier arcs of the Pre-TS feel great on re-read, but i don't know about Post-TS...
and 1, not much to do, just wait

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bit of an odd message in most shonen I have read
starting out with a somewhat underdogs that begins to become too special it stops being a story of inspiration
and rather simply a journey of seeing them get to the top.
From what i've read
people in Japan love the "chosen one" story structure
so it makes sense why it's so popular